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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs34982663 chr10:852521 C/G 0.000105 400 15.35 17.03 12.17 KM Plot
LGG rs35003154 chr1:236515993 C/G 0.000127 406 15.37 16.28 4 KM Plot
LGG rs35099061 chr10:933030 TCA/T 8.08E-6 392 14.75 17.38 10.57 KM Plot
LGG rs35176167 chr15:31867982 A/T 2.76E-5 407 15.37 15.3 14.77 KM Plot
LGG rs35186272 chr11:61169495 C/CT 0.000189 397 15.63 17.73 14.47 KM Plot
LGG rs35214995 chr6:36059291 TGTG/T 9.31E-10 407 15.63 15.15 6.15 KM Plot
LGG rs35342586 chr2:86864733 GTA/G 0 399 15.97 13.23 6.38 KM Plot
LGG rs35370435 chr10:898205 T/C 1.12E-5 405 15.2 17.4 10.57 KM Plot
LGG rs35394603 chr10:941018 C/T 3.61E-5 405 14.9 17.73 12.17 KM Plot
LGG rs35481916 chr10:907441 CT/C 2.66E-6 405 15.17 17.73 10.57 KM Plot
LGG rs35490867 chr6:46930351 T/TA 1.75E-5 403 15.03 16.37 12.5 KM Plot
LGG rs35567307 chr10:915804 G/C 4.8E-6 407 15.13 17.38 10.57 KM Plot
LGG rs35605696 chr11:61231177 A/G 0.000175 406 16.68 18.83 14.67 KM Plot
LGG rs35607253 chr1:173476646 T/TGC 1.36E-7 396 15.18 17.43 1.67 KM Plot
LGG rs35637113 chr10:874149 G/C 3.9E-5 404 15.13 17.75 12.17 KM Plot